dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04170
Location and strand information: 38069 - 38524 (+)
Family: 5.A.3.11.1
Protein type: TC
Protein description: Iron-sulfur protein

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04171
Location and strand information: 38532 - 39827 (-)
Family: Aminotran_1_2
Protein type: STP
Protein description: Valine--pyruvate aminotransferase

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04172
Location and strand information: 39983 - 42013 (-)
Family: GH13|CBM25|CBM26|GH13_19
Protein type: CAZyme
Protein description: Periplasmic alpha-amylase
Protein isoelectric point: 6.2056
Protein molecular weight: 75819.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04173
Location and strand information: 42580 - 43152 (+)
Family: GH73
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.7529
Protein molecular weight: 21661.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04174
Location and strand information: 43188 - 44366 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Xylose operon regulatory protein

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04175
Location and strand information: 44401 - 45582 (-)
Family: 3.A.1.2.4
Protein type: TC
Protein description: Xylose transport system permease protein XylH

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04176
Location and strand information: 45617 - 47101 (-)
Family: 3.A.1.2.4
Protein type: TC
Protein description: Xylose import ATP-binding protein XylG

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04177
Location and strand information: 47174 - 48166 (-)
Family: 3.A.1.2.4
Protein type: TC
Protein description: D-xylose-binding periplasmic protein

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04178
Location and strand information: 48474 - 49859 (+)
Family: null
Protein type: null
Protein description: Xylose isomerase

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04179
Location and strand information: 49918 - 51372 (+)
Family: null
Protein type: null
Protein description: Xylulose kinase

Gene clsuter ID: MGYG000000019_24|CGC1
Gene ID: MGYG000000019_04180
Location and strand information: 51425 - 52420 (-)
Family: 9.B.97.1.1
Protein type: TC
Protein description: O-acetyltransferase WecH

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000019_04170	Iron-sulfur protein	TC	38069	38524	+	5.A.3.11.1
MGYG000000019_04171	Valine--pyruvate aminotransferase	STP	38532	39827	-	Aminotran_1_2
MGYG000000019_04172	Periplasmic alpha-amylase	CAZyme	39983	42013	-	GH13\| CBM25\| CBM26\| GH13_19
MGYG000000019_04173	hypothetical protein	CAZyme	42580	43152	+	GH73
MGYG000000019_04174	Xylose operon regulatory protein	TF	43188	44366	-	HTH_AraC+HTH_AraC
MGYG000000019_04175	Xylose transport system permease protein XylH	TC	44401	45582	-	3.A.1.2.4
MGYG000000019_04176	Xylose import ATP-binding protein XylG	TC	45617	47101	-	3.A.1.2.4
MGYG000000019_04177	D-xylose-binding periplasmic protein	TC	47174	48166	-	3.A.1.2.4
MGYG000000019_04178	Xylose isomerase	null	48474	49859	+	No domain
MGYG000000019_04179	Xylulose kinase	null	49918	51372	+	FGGY_N\| FGGY_C
MGYG000000019_04180	O-acetyltransferase WecH	TC	51425	52420	-	9.B.97.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature